Monday 16 July 2018

Nixos: How do I get get a python with debug info included with packages?

I'm trying to do cython debugging on NixOS. I can easily install cython in a nix-shell (chosen for simplicity of example), like this:

$ nix-shell -p 'python27.withPackages( p: [ p.cython ])'

$ cat /nix/store/s0w3phb2saixi0a9bzk8pjbczjaz8d7r-python-2.7.14-env/bin/python
#! /nix/store/jgw8hxx7wzkyhb2dr9hwsd9h2caaasdc-bash-4.4-p12/bin/bash -e
export PYTHONHOME="/nix/store/s0w3phb2saixi0a9bzk8pjbczjaz8d7r-python-2.7.14-env"
export PYTHONNOUSERSITE="true"
exec "/nix/store/i3bx1iw2d0i3vh9sa1nf92ynlrw324w8-python-2.7.14/bin/python"  "${extraFlagsArray[@]}" "$@"

Then we do a normal nix-shell of just python and see what version of python we get.

[henry@bollum:~/Projects/eyeserver/nixshell]$ nix-shell -p 'python27'
$ which python
/nix/store/i3bx1iw2d0i3vh9sa1nf92ynlrw324w8-python-2.7.14/bin/python
#          ^^^^^^^
#          non-debug

All is well -- we get a non-debug python in both cases. And if we gdb it, we get (no debugging symbols found). See the last line.

$ gdb 
/nix/store/i3bx1iw2d0i3vh9sa1nf92ynlrw324w8-python-2.7.14/bin/python
GNU gdb (GDB) 8.0.1
Copyright (C) 2017 Free Software Foundation, Inc.
License GPLv3+: GNU GPL version 3 or later 
<http://gnu.org/licenses/gpl.html>
This is free software: you are free to change and redistribute it.
There is NO WARRANTY, to the extent permitted by law.  Type "show copying"
and "show warranty" for details.
This GDB was configured as "x86_64-unknown-linux-gnu".
Type "show configuration" for configuration details.
For bug reporting instructions, please see:
<http://www.gnu.org/software/gdb/bugs/>.
Find the GDB manual and other documentation resources online at:
<http://www.gnu.org/software/gdb/documentation/>.
For help, type "help".
Type "apropos word" to search for commands related to "word"...
Reading symbols from /nix/store/i3bx1iw2d0i3vh9sa1nf92ynlrw324w8-python-2.7.14/bin/python...(no debugging symbols found)...done.

When we use enableDebugging, on python by itself, we get different results. $ nix-shell -p 'enableDebugging python27'

$ which python
/nix/store/a4wd8mcpqr54hmw0x95fw8fhvk8avh5a-python-2.7.14/bin/python
#          ^^^^^^
#          debug

$ gdb 
/nix/store/a4wd8mcpqr54hmw0x95fw8fhvk8avh5a-python-2.7.14/bin/python
GNU gdb (GDB) 8.0.1
...
Reading symbols from /nix/store/a4wd8mcpqr54hmw0x95fw8fhvk8avh5a-python-2.7.14/bin/python...done.

The problems come when we try to do this with cython (or any other package) included.
$ nix-shell -p '(enableDebugging python27).withPackages( p: [ p.cython ])'

$ cat `which python`
#! /nix/store/jgw8hxx7wzkyhb2dr9hwsd9h2caaasdc-bash-4.4-p12/bin/bash -e
export PYTHONHOME="/nix/store/s0w3phb2saixi0a9bzk8pjbczjaz8d7r-python-2.7.14-env"
export PYTHONNOUSERSITE="true"
exec "/nix/store/i3bx1iw2d0i3vh9sa1nf92ynlrw324w8-python-2.7.14/bin/python"  "${extraFlagsArray[@]}" "$@"
#                ^^^^^^^
#                non-debug
$ gdb /nix/store/i3bx1iw2d0i3vh9sa1nf92ynlrw324w8-python-2.7.14/bin/python
GNU gdb (GDB) 8.0.1
...
Reading symbols from /nix/store/i3bx1iw2d0i3vh9sa1nf92ynlrw324w8-python-2.7.14/bin/python...(no debugging symbols found)...done.
(gdb) 
quit

The version of python in the environment is now non-debug, and attempting to debug it gets the dreaded (no debugging symbols found). This makes gdb much less useful for debugging cython programs.



from Nixos: How do I get get a python with debug info included with packages?

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