Sunday, 23 January 2022

Can external scripts be included in Snakemake report?

Similar to the following questions, I could not find a definite answer to whether or not external scripts (e.g. .py source) can be included in report as code blocks under the rule table.

Do reports only display code that's inline within the Snakefile? Is there a way to include external scripts?

It's a great framework as far as I've been able to explore it!

Include Parameters and source code in Snakemake HTML Report

Snakemake report - Code not displayed in the report



from Can external scripts be included in Snakemake report?

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