Thursday, 3 October 2019

Using GridSearchCV with IsolationForest for finding outliers

I want to use IsolationForest for finding outliers. I want to find the best parameters for model with GridSearchCV. The problem is that I always get the same error:

TypeError: If no scoring is specified, the estimator passed should have a 'score' method. The estimator IsolationForest(behaviour='old', bootstrap=False, contamination='legacy',
                max_features=1.0, max_samples='auto', n_estimators=100,
                n_jobs=None, random_state=None, verbose=0, warm_start=False) does not.

It seems like its a problem because IsolationForest does not have score method. Is there a way to fix this? Also is there a way to find a score for isolation forest? This is my code:

import pandas as pd
from sklearn.ensemble import IsolationForest
from sklearn.model_selection import GridSearchCV

df = pd.DataFrame({'first': [-112,0,1,28,5,6,3,5,4,2,7,5,1,3,2,2,5,2,42,84,13,43,13],
                   'second': [42,1,2,85,2,4,6,8,3,5,7,3,64,1,4,1,2,4,13,1,0,40,9],
                   'third': [3,4,7,74,3,8,2,4,7,1,53,6,5,5,59,0,5,12,65,4,3,4,11],
                   'result': [5,2,3,0.04,3,4,3,125,6,6,0.8,9,1,4,59,12,1,4,0,8,5,4,1]})

x = df.iloc[:,:-1]

tuned = {'n_estimators':[70,80,100,120,150,200], 'max_samples':['auto', 1,3,5,7,10],
         'contamination':['legacy', 'outo'], 'max_features':[1,2,3,4,5,6,7,8,9,10,13,15],
         'bootstrap':[True,False], 'n_jobs':[None,1,2,3,4,5,6,7,8,10,15,20,25,30], 'behaviour':['old', 'new'],
         'random_state':[None,1,5,10,42], 'verbose':[0,1,2,3,4,5,6,7,8,9,10], 'warm_start':[True,False]}

isolation_forest = GridSearchCV(IsolationForest(), tuned)

model = isolation_forest.fit(x)

list_of_val = [[1,35,3], [3,4,5], [1,4,66], [4,6,1], [135,5,0]]
df['outliers'] = model.predict(x)
df['outliers'] = df['outliers'].map({-1: 'outlier', 1: 'good'})

print(model.best_params_)
print(df)


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